Showing posts with label small. Show all posts
Showing posts with label small. Show all posts

Saturday, July 2, 2011

At small scales, tug-of-war between electrons can lead to magnetism under surprising circumstances

At small scales, tug-of-war between electrons can lead to magnetism under surprising circumstances

Enlarge

A quantum dots two mobile electrons will actually influence the manganese spins differently. That's because while one mobile electron prefers to stay in the middle of the quantum dot, the other prefers to locate further toward the edges. As a result, manganese atoms in different parts of the quantum dot receive different messages about which way to align their spins. In the "tug-of-war" that ensues, the mobile electron that interacts more intensely with the manganese atoms "wins," aligning more spins and causing the quantum dot, as a whole, to be magnetic. Credit: University at Buffalo

(PhysOrg.com) -- At the smallest scales, magnetism may not work quite the way scientists expected, according to a recent paper in Physical Review Letters by Rafal Oszwaldowski and Igor Zutic of the University at Buffalo and Andre Petukhov of the South Dakota School of Mines and Technology.

The three physicists have proposed that it would be possible to create a quantum dot -- a kind of nanoparticle -- that is under surprising circumstances.


Magnetism is determined by a property all electrons possess: spin. Individual spins are akin to tiny bar magnets, which have north and south poles. Electrons can have an "up" or "down" spin, and a material is magnetic when most of its electrons have the same spin.


Mobile electrons can act as "magnetic messengers," using their own spin to align the spins of nearby atoms. If two mobile electrons with opposite spins are in an area, says that their influences should cancel out, leaving a material without .


But the UB-South Dakota team has proposed that at very small scales, magnetism may be more nuanced than that. It is possible, the physicists say, to observe a peculiar form of magnetism in quantum dots whose mobile electrons have opposing spins.


In their article, the researchers describe a theoretical scenario involving a quantum dot that contains two free-floating, mobile electrons with opposite spins, along with manganese atoms fixed at precise locations within the quantum dot.


The quantum dot's mobile electrons act as "magnetic messengers," using their own spins to align the spins of nearby manganese atoms.


Under these circumstances, conventional thinking would predict a stalemate: Each mobile electron exerts an equal influence over spins of manganese atoms, so neither is able to "win."


Through complex calculations, however, Oszwaldowski, ?utic and Petukhov show that the quantum dot's two mobile electrons will actually influence the manganese spins differently.


That's because while one mobile electron prefers to stay in the middle of the quantum dot, the other prefers to locate further toward the edges. As a result, manganese atoms in different parts of the quantum dot receive different messages about which way to align their spins.


In the "tug-of-war" that ensues, the mobile electron that interacts more intensely with the manganese atoms "wins," aligning more spins and causing the quantum dot, as a whole, to be magnetic. (For a visual representation of this tug-of-war, see Figure 1.)


This prediction, if proven, could "completely alter the basic notions that we have about magnetic interactions," ?utic says.


"When you have two mobile electrons with opposite spins, the assumption is that there is a nice balance of up and down spins, and therefore, there is no magnetic message, or nothing that could be sent to align nearby manganese spins," he says. "But what we are saying is that it is actually a tug of war. The building blocks of magnetism are still mysterious and hold many surprises."


Scientists including UB Professor Athos Petrou, UB College of Arts and Sciences Dean Bruce McCombe and UB Vice President for Research Alexander Cartwright have demonstrated experimentally that in a quantum dot with just one mobile electron, the mobile electron will act as a magnetic messenger, robustly aligning the spins of adjacent manganese atoms.


Now, Petrou and his collaborators are interested in taking their research a step further and testing the tug-of-war prediction for two-electron , ?utic says.


?utic adds that learning more about magnetism is important as society continues to find novel uses for magnets, which could advance technologies including lasers, medical imaging devices and, importantly, computers.


He explains the promise of magnet- or spin-based computing technology -- called "spintronics" -- by contrasting it with conventional electronics. Modern, electronic gadgets record and read data as a blueprint of ones and zeros that are represented, in circuits, by the presence or absence of electrons. Processing information requires moving electrons, which consumes energy and produces heat.


Spintronic gadgets, in contrast, store and process data by exploiting electrons' "up" and "down" spins, which can stand for the ones and zeros devices read. Future energy-saving improvements in data processing could include devices that process information by "flipping" spin instead of shuttling electrons around.


Studying how magnetism works on a small scale is particularly important, ?utic says, because "we would like to pack more information into less space."


And, of course, unraveling the mysteries of magnetism is satisfying for other, simpler reasons.


"Magnets have been fascinating people for thousands of years," ?utic says. "Some of this fascination was not always related to how you can make a better compass or a better computer hard drive. It was just peculiar that you have materials that attract one another, and you wanted to know why."

Provided by University at Buffalo (news : web)

At small scales, tug-of-war between electrons can lead to magnetism under surprising circumstances

At small scales, tug-of-war between electrons can lead to magnetism under surprising circumstances

Enlarge

A quantum dots two mobile electrons will actually influence the manganese spins differently. That's because while one mobile electron prefers to stay in the middle of the quantum dot, the other prefers to locate further toward the edges. As a result, manganese atoms in different parts of the quantum dot receive different messages about which way to align their spins. In the "tug-of-war" that ensues, the mobile electron that interacts more intensely with the manganese atoms "wins," aligning more spins and causing the quantum dot, as a whole, to be magnetic. Credit: University at Buffalo

(PhysOrg.com) -- At the smallest scales, magnetism may not work quite the way scientists expected, according to a recent paper in Physical Review Letters by Rafal Oszwaldowski and Igor Zutic of the University at Buffalo and Andre Petukhov of the South Dakota School of Mines and Technology.

The three physicists have proposed that it would be possible to create a quantum dot -- a kind of nanoparticle -- that is under surprising circumstances.


Magnetism is determined by a property all electrons possess: spin. Individual spins are akin to tiny bar magnets, which have north and south poles. Electrons can have an "up" or "down" spin, and a material is magnetic when most of its electrons have the same spin.


Mobile electrons can act as "magnetic messengers," using their own spin to align the spins of nearby atoms. If two mobile electrons with opposite spins are in an area, says that their influences should cancel out, leaving a material without .


But the UB-South Dakota team has proposed that at very small scales, magnetism may be more nuanced than that. It is possible, the physicists say, to observe a peculiar form of magnetism in quantum dots whose mobile electrons have opposing spins.


In their article, the researchers describe a theoretical scenario involving a quantum dot that contains two free-floating, mobile electrons with opposite spins, along with manganese atoms fixed at precise locations within the quantum dot.


The quantum dot's mobile electrons act as "magnetic messengers," using their own spins to align the spins of nearby manganese atoms.


Under these circumstances, conventional thinking would predict a stalemate: Each mobile electron exerts an equal influence over spins of manganese atoms, so neither is able to "win."


Through complex calculations, however, Oszwaldowski, ?utic and Petukhov show that the quantum dot's two mobile electrons will actually influence the manganese spins differently.


That's because while one mobile electron prefers to stay in the middle of the quantum dot, the other prefers to locate further toward the edges. As a result, manganese atoms in different parts of the quantum dot receive different messages about which way to align their spins.


In the "tug-of-war" that ensues, the mobile electron that interacts more intensely with the manganese atoms "wins," aligning more spins and causing the quantum dot, as a whole, to be magnetic. (For a visual representation of this tug-of-war, see Figure 1.)


This prediction, if proven, could "completely alter the basic notions that we have about magnetic interactions," ?utic says.


"When you have two mobile electrons with opposite spins, the assumption is that there is a nice balance of up and down spins, and therefore, there is no magnetic message, or nothing that could be sent to align nearby manganese spins," he says. "But what we are saying is that it is actually a tug of war. The building blocks of magnetism are still mysterious and hold many surprises."


Scientists including UB Professor Athos Petrou, UB College of Arts and Sciences Dean Bruce McCombe and UB Vice President for Research Alexander Cartwright have demonstrated experimentally that in a quantum dot with just one mobile electron, the mobile electron will act as a magnetic messenger, robustly aligning the spins of adjacent manganese atoms.


Now, Petrou and his collaborators are interested in taking their research a step further and testing the tug-of-war prediction for two-electron , ?utic says.


?utic adds that learning more about magnetism is important as society continues to find novel uses for magnets, which could advance technologies including lasers, medical imaging devices and, importantly, computers.


He explains the promise of magnet- or spin-based computing technology -- called "spintronics" -- by contrasting it with conventional electronics. Modern, electronic gadgets record and read data as a blueprint of ones and zeros that are represented, in circuits, by the presence or absence of electrons. Processing information requires moving electrons, which consumes energy and produces heat.


Spintronic gadgets, in contrast, store and process data by exploiting electrons' "up" and "down" spins, which can stand for the ones and zeros devices read. Future energy-saving improvements in data processing could include devices that process information by "flipping" spin instead of shuttling electrons around.


Studying how magnetism works on a small scale is particularly important, ?utic says, because "we would like to pack more information into less space."


And, of course, unraveling the mysteries of magnetism is satisfying for other, simpler reasons.


"Magnets have been fascinating people for thousands of years," ?utic says. "Some of this fascination was not always related to how you can make a better compass or a better computer hard drive. It was just peculiar that you have materials that attract one another, and you wanted to know why."

Provided by University at Buffalo (news : web)

Wednesday, June 29, 2011

Largest biochemical circuit built out of small synthetic DNA molecules


Largest biochemical circuit built out of small synthetic DNA molecules

 


A wiring diagram specifying a system of 74 DNA molecules that constitute the largest synthetic circuit of its type ever made. The circuit computes the square root of a number up to 15 and rounds down to the nearest integer (the discrete square root of a four-bit integer). Credit: Caltech/Lulu Qian


In many ways, life is like a computer. An organism's genome is the software that tells the cellular and molecular machinery?the hardware?what to do. But instead of electronic circuitry, life relies on biochemical circuitry?complex networks of reactions and pathways that enable organisms to function. Now, researchers at the California Institute of Technology (Caltech) have built the most complex biochemical circuit ever created from scratch, made with DNA-based devices in a test tube that are analogous to the electronic transistors on a computer chip.


Engineering these allows researchers to explore the principles of information processing in biological systems, and to design biochemical pathways with decision-making capabilities. Such circuits would give biochemists unprecedented control in designing chemical reactions for applications in biological and chemical engineering and industries. For example, in the future a synthetic biochemical circuit could be introduced into a clinical blood sample, detect the levels of a variety of molecules in the sample, and integrate that information into a diagnosis of the pathology.


"We're trying to borrow the ideas that have had huge success in the electronic world, such as abstract representations of computing operations, programming languages, and compilers, and apply them to the biomolecular world," says Lulu Qian, a senior postdoctoral scholar in bioengineering at Caltech and lead author on a paper published in the June 3 issue of the journal Science.


Along with Erik Winfree, Caltech professor of computer science, computation and neural systems, and bioengineering, Qian used a new kind of DNA-based component to build the largest artificial biochemical circuit ever made. Previous lab-made biochemical circuits were limited because they worked less reliably and predictably when scaled to larger sizes, Qian explains. The likely reason behind this limitation is that such circuits need various molecular structures to implement different functions, making large systems more complicated and difficult to debug. The researchers' new approach, however, involves components that are simple, standardized, reliable, and scalable, meaning that even bigger and more complex circuits can be made and still work reliably.


"You can imagine that in the computer industry, you want to make better and better computers," Qian says. "This is our effort to do the same. We want to make better and better biochemical circuits that can do more sophisticated tasks, driving molecular devices to act on their environment."


To build their circuits, the researchers used pieces of DNA to make so-called logic gates?devices that produce on-off output signals in response to on-off input signals. Logic gates are the building blocks of the digital logic circuits that allow a computer to perform the right actions at the right time. In a conventional computer, logic gates are made with electronic transistors, which are wired together to form circuits on a silicon chip. Biochemical circuits, however, consist of molecules floating in a test tube of salt water. Instead of depending on electrons flowing in and out of transistors, DNA-based logic gates receive and produce molecules as signals. The molecular signals travel from one specific gate to another, connecting the circuit as if they were wires.


Winfree and his colleagues first built such a biochemical circuit in 2006. In this work, DNA signal molecules connected several DNA logic gates to each other, forming what's called a multilayered circuit. But this earlier circuit consisted of only 12 different DNA molecules, and the circuit slowed down by a few orders of magnitude when expanded from a single logic gate to a five-layered circuit. In their new design, Qian and Winfree have engineered logic gates that are simpler and more reliable, allowing them to make circuits at least five times larger.


Their new logic gates are made from pieces of either short, single-stranded DNA or partially double-stranded DNA in which single strands stick out like tails from the DNA's double helix. The single-stranded DNA molecules act as input and output signals that interact with the partially double-stranded ones.


"The molecules are just floating around in solution, bumping into each other from time to time," Winfree explains. "Occasionally, an incoming strand with the right DNA sequence will zip itself up to one strand while simultaneously unzipping another, releasing it into solution and allowing it to react with yet another strand." Because the researchers can encode whatever DNA sequence they want, they have full control over this process. "You have this programmable interaction," he says.


Qian and Winfree made several circuits with their approach, but the largest?containing 74 different DNA molecules?can compute the square root of any number up to 15 (technically speaking, any four-bit binary number) and round down the answer to the nearest integer. The researchers then monitor the concentrations of output molecules during the calculations to determine the answer. The calculation takes about 10 hours, so it won't replace your laptop anytime soon. But the purpose of these circuits isn't to compete with electronics; it's to give scientists logical control over biochemical processes.


Their circuits have several novel features, Qian says. Because reactions are never perfect?the molecules don't always bind properly, for instance?there's inherent noise in the system. This means the molecular signals are never entirely on or off, as would be the case for ideal binary logic. But the new logic gates are able to handle this noise by suppressing and amplifying signals?for example, boosting a signal that's at 80 percent, or inhibiting one that's at 10 percent, resulting in signals that are either close to 100 percent present or nonexistent.


All the logic gates have identical structures with different sequences. As a result, they can be standardized, so that the same types of components can be wired together to make any circuit you want. What's more, Qian says, you don't have to know anything about the behind the circuit to make one. If you want a circuit that, say, automatically diagnoses a disease, you just submit an abstract representation of the logic functions in your design to a compiler that the researchers provide online, which will then translate the design into the DNA components needed to build the circuit. In the future, an outside manufacturer can then make those parts and give you the circuit, ready to go.


The circuit components are also tunable. By adjusting the concentrations of the types of DNA, the researchers can change the functions of the logic gates. The circuits are versatile, featuring plug-and-play components that can be easily reconfigured to rewire the circuit. The simplicity of the also allows for more efficient techniques that synthesize them in parallel.


"Like Moore's Law for silicon electronics, which says that computers are growing exponentially smaller and more powerful every year, molecular systems developed with nanotechnology have been doubling in size roughly every three years," Winfree says. Qian adds, "The dream is that synthetic biochemical circuits will one day achieve complexities comparable to life itself."